Bioinformatics tools and databases for analysis of next-generation sequence data
نویسندگان
چکیده
منابع مشابه
Genome sequencing and next-generation sequence data analysis: A comprehensive compilation of bioinformatics tools and databases
Genomics has become a ground-breaking field in all areas of the life sciences. The advanced genomics and the development of high-throughput techniques have lately provided insight into whole-genome characterization of a wide range of organisms. In the post-genomic era, new technologies have revealed an outbreak of prerequisite genomic sequences and supporting data to understand genome wide func...
متن کاملBioinformatics for Next Generation Sequencing Data
The emergence of next-generation sequencing (NGS) platforms imposes increasing demands on statistical methods and bioinformatic tools for the analysis and the management of the huge amounts of data generated by these technologies. Even at the early stages of their commercial availability, a large number of softwares already exist for analyzing NGS data. These tools can be fit into many general ...
متن کاملBioinformatics in bacterial molecular epidemiology and public health: databases, tools and the next-generation sequencing revolution.
Advances in typing methodologies have been the driving force in the field of molecular epidemiology of pathogens. The development of molecular methodologies, and more recently of DNA sequencing methods to complement and improve phenotypic identification methods, was accompanied by the generation of large amounts of data and the need to develop ways of storing and analysing them. Simultaneously,...
متن کاملBioinformatics Methods and Biological Interpretation for Next-Generation Sequencing Data
1School of Computer Science and Technology, Harbin Institute of Technology, Harbin, Heilongjiang 150001, China 2Center for Computational Biology and Bioinformatics, Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN 46202, USA 3Department of Computer Science, Wayne State University, Detroit, MI 48202, USA 4Life Sciences, CentrumWiskunde & Infor...
متن کاملAnalysis of Metagenomics Next Generation Sequence Data for Fungal ITS Barcoding: Do You Need Advance Bioinformatics Experience?
During the last few decades, most of microbiology laboratories have become familiar in analyzing Sanger sequence data for ITS barcoding. However, with the availability of next-generation sequencing platforms in many centers, it has become important for medical mycologists to know how to make sense of the massive sequence data generated by these new sequencing technologies. In many reference lab...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Briefings in Functional Genomics
سال: 2011
ISSN: 2041-2649,2041-2657
DOI: 10.1093/bfgp/elr037